The detailed information of tRNA gene sequence


Sequence ID>SRA1009489
Genome IDSRR020491.248515
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 91
End posion on genome 167
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accaaaaaca
tRNA gene sequence 
CGGGGTGTAGCTCAGTTGGTTAGAGCGATCGCCTGTCACGCGATAGGTCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
ttaatttgat
Secondary structure (Cloverleaf model)
>SRA1009489	Asp	GTC
                   a      GCCA ttaatttgat
                     C   C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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