The detailed information of tRNA gene sequence


Sequence ID>SRA1009495
Genome IDSRR020491.254671
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 40
End posion on genome 124
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtagacccgG
tRNA gene sequence 
GGAGGATTAGCGTAATTGGTAACGCACCGGTCTTGAAAACCGGCGACTTCGGTCTTGGGG
GTTCGAGTCCCCCATCCCTTTTCC
Downstream region at tRNA end position 
ctgcatagcc
Secondary structure (Cloverleaf model)
>SRA1009495	Ser	TGA
                   G      TTCC ctgcatagcc
                     G + T
                     G + T
                     A   C
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     C C C C C     A
      T A A        A      | | | | |     G
    T       T G C G       G G G G G     C
    G       | | | |                 T T
    G       A C G C
      T A          A     CGACTTCGGTCTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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