The detailed information of tRNA gene sequence


Sequence ID>SRA1009512
Genome IDSRR020491.262388
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 285
End posion on genome 196
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgttttaaat
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCAGGCTTGGAAAGCTTGTGTACTGTTAAAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttagaa
Secondary structure (Cloverleaf model)
>SRA1009512	Ser	GGA
                   t      GCCA ttttttagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACTGTTAAAGGTACC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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