The detailed information of tRNA gene sequence


Sequence ID>SRA1009513
Genome IDSRR020491.262498
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 114
End posion on genome 189
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcttcgcctt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCCGCGGTTCGATC
CCGCGTAGCTCCACCA
Downstream region at tRNA end position 
attccttaca
Secondary structure (Cloverleaf model)
>SRA1009513	Ala	TGC
                   t      ACCA attccttaca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     G C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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