The detailed information of tRNA gene sequence


Sequence ID>SRA1009531
Genome IDSRR020491.267366
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 115
End posion on genome 39
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagggtgcag
tRNA gene sequence 
GGACCCGTAGCTCAGTTGGTTAGAGCGCTCGGCTCATAACCGAGTGGTCATCGGTTCAAA
TCCGGTCGGGTCCACCT
Downstream region at tRNA end position 
ccccatcgcc
Secondary structure (Cloverleaf model)
>SRA1009531	Met	CAT
                   g      ACCT ccccatcgcc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
      T G A        A      | + | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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