The detailed information of tRNA gene sequence


Sequence ID>SRA1009580
Genome IDSRR020491.284463
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 3
End posion on genome 74
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
GGGCGATTAGCTCAGAGGTAGAGCACTACCCTGACACGGTAGGAGTCACTGGTTCGATTC
CAGTATCGCCCAttc
Downstream region at tRNA end position 
ttcgagttta
Secondary structure (Cloverleaf model)
>SRA1009580	Val	GAC
                   a      Attc ttcgagttta
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T T
                    T     T G A C C     A
        G A        A      | | | | |     G
      A     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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