The detailed information of tRNA gene sequence


Sequence ID>SRA1009586
Genome IDSRR020491.285863
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 230
End posion on genome 141
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
acttattcta
tRNA gene sequence
GGAGGGATCGCATAGTCCGGTCTAGTGCGCGACACTCGAAATGTCGTGAGTCTTTATAGG
CTCCGTGGGTTCGAATCCCACTCCCTCCGCtt
Downstream region at tRNA end position
taaacttcag
Secondary structure (Cloverleaf model)
>SRA1009586	Ser	CGA
                   a      GCtt taaacttcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  C         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    T C T A        G     TGAGTCTTTATAGGCTCC
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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