The detailed information of tRNA gene sequence


Sequence ID>SRA1009595
Genome IDSRR020491.289382
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 93
End posion on genome 168
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taaaactctt
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGAGGTTGTGGGTTCGAGC
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aattagggaa
Secondary structure (Cloverleaf model)
>SRA1009595	Trp	CCA
                   t      GCCA aattagggaa
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          C G
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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