The detailed information of tRNA gene sequence


Sequence ID>SRA1009608
Genome IDSRR020491.294411
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 114
End posion on genome 38
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatatcttct
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCACCGGAATCATAATCCGGGTGTCCGGGGTTCGAA
TCCCTGCGCCGCCACAA
Downstream region at tRNA end position 
aaatgaagaa
Secondary structure (Cloverleaf model)
>SRA1009608	Met	CAT
                   t      ACAA aaatgaagaa
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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