The detailed information of tRNA gene sequence


Sequence ID>SRA1009611
Genome IDSRR020491.296023
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 178
End posion on genome 104
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ggctttttta
tRNA gene sequence 
GGCGTCGTACCCAAGCGGTAAGGGAGCGGTCTGCAAAACCGTCATGCACCAGTTCGAATC
TGGTCGACGCCTCAA
Downstream region at tRNA end position 
tagggggtct
Secondary structure (Cloverleaf model)
>SRA1009611	Cys	GCA
                   a      TCAA tagggggtct
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T G G T C     A
        G A        A      | | | | |     G
      C     A C C C       A C C A G     C
      G       | | |                 T T
      G     A G G G
        T A        A     CATGC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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