The detailed information of tRNA gene sequence


Sequence ID>SRA1009634
Genome IDSRR020491.307158
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 64
End posion on genome 154
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tattgggaaT
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAAGCGGCTCCCTGCTAAGGAGTTACAGGAGGTAACTTC
TGTCGAGGGTTCGAATCCCTCCCTCTCCGTtc
Downstream region at tRNA end position 
tcattaaggt
Secondary structure (Cloverleaf model)
>SRA1009634	Ser	GCT
                   T      GTtc tcattaaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TACAGGAGGTAACTTCTGTC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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