The detailed information of tRNA gene sequence


Sequence ID>SRA1009636
Genome IDSRR020491.307641
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 19
End posion on genome 95
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcccaccatt
tRNA gene sequence 
TGGGGTGTAGCTCAGTTGGTTAGAGCGCCTGCCTGTCACGCAGGAGGTCGCCGGTTCGAG
CCCGGTCACTCCCGCCA
Downstream region at tRNA end position 
ctcccgcgat
Secondary structure (Cloverleaf model)
>SRA1009636	Asp	GTC
                   t      GCCA ctcccgcgat
                     T   C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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