The detailed information of tRNA gene sequence


Sequence ID>SRA1009672
Genome IDSRR020491.317699
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 144
End posion on genome 219
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actcttagat
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTAGAGCACCGGTCTCCAAAACCGGGGGCTGCGGGTTCAAGT
CCTGCCACTCCTGCCA
Downstream region at tRNA end position 
taattagagt
Secondary structure (Cloverleaf model)
>SRA1009672	Trp	CCA
                   t      GCCA taattagagt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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