The detailed information of tRNA gene sequence


Sequence ID>SRA1009674
Genome IDSRR020491.318907
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 68
End posion on genome 144
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catatggttt
tRNA gene sequence 
GGGCCAGTAGCTCAGTTGGTTAGAGCTGACGACTCATAATCGTCCGGTCGTAGGTTCAAG
TCCTACCTGGCCCACCA
Downstream region at tRNA end position 
aatatttcgc
Secondary structure (Cloverleaf model)
>SRA1009674	Met	CAT
                   t      ACCA aatatttcgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     CGGTC
                    G - C
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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