The detailed information of tRNA gene sequence


Sequence ID>SRA1009686
Genome IDSRR020491.323021
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 173
End posion on genome 82
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggtcaataa
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGCGCTTAGGGGGCGAAAGCTC
TCTCATGGGTTCGAATCCCATTCCCTCCGCCG
Downstream region at tRNA end position 
aaaaacattg
Secondary structure (Cloverleaf model)
>SRA1009686	Ser	GCT
                   a      GCCG aaaaacattg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       A T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TAGGGGGCGAAAGCTCTCTC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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