The detailed information of tRNA gene sequence


Sequence ID>SRA1009703
Genome IDSRR020491.330130
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 104
End posion on genome 179
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position
ttcaccctgt
tRNA gene sequence
GCCCCCGTAGCTCAGTTGGATAGAGCACCGGCCTCCGAAGCCGGGAGCGTGAGTTCGAGT
CTCGCCGGGGGCGCCA
Downstream region at tRNA end position
tttatgcgcc
Secondary structure (Cloverleaf model)
>SRA1009703	Arg	CCG
                   t      GCCA tttatgcgcc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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