The detailed information of tRNA gene sequence


Sequence ID>SRA1009710
Genome IDSRR020491.331467
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 249
End posion on genome 173
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gcctggtttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGGAGGGGGTCAAAGGTTCGAG
TCCTTTACTGCCCACCA
Downstream region at tRNA end position 
aaaaaacggg
Secondary structure (Cloverleaf model)
>SRA1009710	Val	TAC
                   t      ACCA aaaaaacggg
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     T - A          T G
                    T     T T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGGTC
                    T + G
                    C   A
                    T + G
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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