The detailed information of tRNA gene sequence


Sequence ID>SRA1009730
Genome IDSRR020491.339073
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 193
End posion on genome 118
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaaacttctc
tRNA gene sequence 
GGGCGCGTAACTCAATTGGTAGAGTGCCACCCTTACAAGGTGGAAGTTACAGGTTCAAGT
CCTGTCGTGCCCACCA
Downstream region at tRNA end position 
ctctaaaccc
Secondary structure (Cloverleaf model)
>SRA1009730	Val	TAC
                   c      ACCA ctctaaaccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T A A        A      | | | | |     A
    T       C T C A       A C A G G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AAGTT
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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