The detailed information of tRNA gene sequence


Sequence ID>SRA1009738
Genome IDSRR020491.340819
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 185
End posion on genome 96
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgagtgcgg
tRNA gene sequence 
GGAAAGATGACAGAGTGGACGATTGTGCGCGACTGCTAATCGCGTGAGCCTGCAAAGGTT
CCGAGGGTTCGAATCCCTCTCTTTCCGCCA
Downstream region at tRNA end position 
catctcttct
Secondary structure (Cloverleaf model)
>SRA1009738	Ser	GCT
                   g      GCCA catctcttct
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C A       G A G G G     C
    G       + | | |                 T T
    A       T T G T
      C G A        G     TGAGCCTGCAAAGGTTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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