The detailed information of tRNA gene sequence


Sequence ID>SRA1009747
Genome IDSRR020491.345225
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 10
End posion on genome 96
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ncagagcgct
tRNA gene sequence 
GCGGCAGTCGCATAGCCTGGCCATTGCGCTGGATTGCTAATCCAGTGGTATTTTACCTCG
GGAGTTCGAATCTCCCCTGCCGCGCCA
Downstream region at tRNA end position 
ccagcccaag
Secondary structure (Cloverleaf model)
>SRA1009747	Ser	GCT
                   t      GCCA ccagcccaag
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C C C T C     A
    C C G A        C      | | | | |     G
  T         T A C G       G G G A G     C
  G           | | |                 T T
  G         T T G C
    C C A          G     TGGTATTTTACCTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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