The detailed information of tRNA gene sequence


Sequence ID>SRA1009751
Genome IDSRR020491.346447
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 249
End posion on genome 161
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaccatacac
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGCCGAACAGGCGCGCCTGGAAAGCGCGTAGGGGAACTTCCCCT
CGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
caagcttgtt
Secondary structure (Cloverleaf model)
>SRA1009751	Ser	GGA
                   c      GCCA caagcttgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G C G G G     C
    G         | | |                 T T
    C       A C A G
      C G A        G     TAGGGGAACTTCCCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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