The detailed information of tRNA gene sequence


Sequence ID>SRA1009765
Genome IDSRR020491.350850
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 218
End posion on genome 296
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
attctgtagG
tRNA gene sequence 
GGCCGGGTAGCTCAGTTGGTTAGAGCACACCCTTGATAAGGGTGGGGTCGGATAGTTCGA
GTCTATCTCGGCCCACCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1009765	Ile	GAT
                   G      ACCA aannnnnnnn
                     G - C
                     G - C
                     C   C
                     C - G
                     G   G
                     G - C
                     G + T          T G
                    T     C T A T C     A
      T G A        A      | | | | |     G
    T       C T C G       G A T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTCG
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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