The detailed information of tRNA gene sequence


Sequence ID>SRA1009771
Genome IDSRR020491.352584
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 73
End posion on genome 146
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaattactga
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTACACTCATAATGTATTGGTCCCAGGTTCGAG
TCCTGGCGGGCCCCgac
Downstream region at tRNA end position 
ccaattgtaa
Secondary structure (Cloverleaf model)
>SRA1009771	Met	CAT
                   a      Cgac ccaattgtaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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