The detailed information of tRNA gene sequence


Sequence ID>SRA1009773
Genome IDSRR020491.353015
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 219
End posion on genome 143
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cattaatcgt
tRNA gene sequence 
AGGAGCGTAGCTCAGATGGCTAGAGCGCTGGTCTCCAAAACCAGAGGTCGGGGGTTCGAT
TCCTCCCGCTCCTGCCA
Downstream region at tRNA end position 
tttgccgggg
Secondary structure (Cloverleaf model)
>SRA1009773	Trp	CCA
                   t      GCCA tttgccgggg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T T
                    T     C C T C C     A
      A G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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