The detailed information of tRNA gene sequence


Sequence ID>SRA1009791
Genome IDSRR020491.359210
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 115
End posion on genome 188
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
cacaaatatc
tRNA gene sequence 
GCTCCATTAGCTCAGTTGGTCAGAGCGTTGTACTTATAATGCAAAGGTCGGCGGTTCGAG
CCCGCCATGGAGCAtta
Downstream region at tRNA end position 
ttattaatat
Secondary structure (Cloverleaf model)
>SRA1009791	Ile	TAT
                   c      Atta ttattaatat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A          C G
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    T + G
                    A - T
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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