The detailed information of tRNA gene sequence


Sequence ID>SRA1009799
Genome IDSRR020491.360936
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 45
End posion on genome 121
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
attttttatt
tRNA gene sequence 
GGGCCGGTCGTTCAGCCTGGTAGGATGCGCCCATGGCATGGGTGAGGTCAAGGGTTCAAA
TCCCTTCCGGTCCACCA
Downstream region at tRNA end position 
ttatgaattt
Secondary structure (Cloverleaf model)
>SRA1009799	Ala	GGC
                   t      ACCA ttatgaattt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        C      | | | | |     A
    C       C T T G       A A G G G     C
    T       | + | +                 T T
    G       G G A T
      G T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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