The detailed information of tRNA gene sequence


Sequence ID>SRA1009815
Genome IDSRR020491.365943
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 113
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaggtagttc
tRNA gene sequence 
GGGGTTGTAGTTCAGTTGGTTAGAACGCTGGCCTGTCACGCCAGAGGTCGCGAGTTCGAG
TCTCGTCAATCCCGCCA
Downstream region at tRNA end position 
tacttttcta
Secondary structure (Cloverleaf model)
>SRA1009815	Asp	GTC
                   c      GCCA tacttttcta
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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