The detailed information of tRNA gene sequence


Sequence ID>SRA1009834
Genome IDSRR020491.370906
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 34
End posion on genome 123
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaaaccac
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAAAGCACTGGTCTTGAAAACCAGCAATGGGGCAACTCAT
TCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ttataattta
Secondary structure (Cloverleaf model)
>SRA1009834	Ser	TGA
                   c      GCCA ttataattta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G           | |                 T T
    T       A A G C
      T G A        A     CAATGGGGCAACTCATTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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