The detailed information of tRNA gene sequence


Sequence ID>SRA1009842
Genome IDSRR020491.372800
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 275
End posion on genome 202
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ttcttattat
tRNA gene sequence 
GGGCCGCTAGCTCAGTTGGTAGAGCACTTGACTTTTAATCAAGTGGTCGAAGGTTCGATC
CCTTCGCGGCTCACtt
Downstream region at tRNA end position 
ttcttgtagt
Secondary structure (Cloverleaf model)
>SRA1009842	Lys	TTT
                   t      ACtt ttcttgtagt
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G          C T
                    T     C T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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