The detailed information of tRNA gene sequence


Sequence ID>SRA1009848
Genome IDSRR020491.374689
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 234
End posion on genome 145
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tatttagcaa
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTTAAGGCGCAGGCTTGGAAAGCTTGTGTACTGTCAAAGGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCT
Downstream region at tRNA end position 
attttttaga
Secondary structure (Cloverleaf model)
>SRA1009848	Ser	GGA
                   a      GCCT attttttaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTACTGTCAAAGGTACC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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