The detailed information of tRNA gene sequence


Sequence ID>SRA1009862
Genome IDSRR020491.379497
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 135
End posion on genome 60
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aataattttt
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGGAGAGCGCTACACTGGCAGTGTAGAGGTCAGGGGTTCGAAT
CCCCTTAGCTCCACCA
Downstream region at tRNA end position 
ttcaaatatc
Secondary structure (Cloverleaf model)
>SRA1009862	Ala	GGC
                   t      ACCA ttcaaatatc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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