The detailed information of tRNA gene sequence


Sequence ID>SRA1009871
Genome IDSRR020491.382691
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 133
End posion on genome 57
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnnnnttt
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGTACTTGACTGGGGGTCAAGTGGTCAGAGGTTCAAA
TCCTCTCGTCCCGACCA
Downstream region at tRNA end position 
actttcaaac
Secondary structure (Cloverleaf model)
>SRA1009871	Pro	GGG
                   t      ACCA actttcaaac
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     A
    C       C G C G       A G A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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