The detailed information of tRNA gene sequence


Sequence ID>SRA1009886
Genome IDSRR020491.388381
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 267
End posion on genome 192
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
TCCGGTGTAGCTCAGCTGGTAGAGCGTCTGATTTGTAATCAGATGGTCGGGGGTTCGAGT
CCCTTCGCCGGCTCTA
Downstream region at tRNA end position 
caaaattgct
Secondary structure (Cloverleaf model)
>SRA1009886	Thr	TGT
                   n      TCTA caaaattgct
                     T   C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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