The detailed information of tRNA gene sequence


Sequence ID>SRA1009891
Genome IDSRR020491.391172
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 72
End posion on genome 162
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaacagatta
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGTTGAAAGGGCACGCCTGGAAAGCGTGTGTGCGTTAATAGCGT
ACCGAGGGTTCGAACCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gaatatgttg
Secondary structure (Cloverleaf model)
>SRA1009891	Ser	GGA
                   a      GCCA gaatatgttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          C A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    T       A A G G
      T G A        G     TGTGCGTTAATAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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