The detailed information of tRNA gene sequence


Sequence ID>SRA1009894
Genome IDSRR020491.391614
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 32
End posion on genome 116
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcattcatag
tRNA gene sequence 
GCGGGGATCGCCTAGCTCGGTAGGGCGTAGGATTGCTAATCCTATGTTCGCAAGAACTCG
TGGGTTCAAATCCCTCTCCCCGCGCtt
Downstream region at tRNA end position 
ttttcaagta
Secondary structure (Cloverleaf model)
>SRA1009894	Ser	GCT
                   g      GCtt ttttcaagta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    T       T C C G       G T G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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