The detailed information of tRNA gene sequence


Sequence ID>SRA1009897
Genome IDSRR020491.393374
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 158
End posion on genome 85
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
caaaaatcat
tRNA gene sequence 
GGCTCGGTGGCAGAGTGGTTATGTGGGGGCCTGCAAAGCCTTTAACAGCAGTTCGATTCC
GCTCCGAGCCTCCA
Downstream region at tRNA end position 
attttctctt
Secondary structure (Cloverleaf model)
>SRA1009897	Cys	GCA
                   t      TCCA attttctctt
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T T
                    T     T C G C C     A
        G A        G      | | |   |     G
      T     G A C G       A G C A G     C
      G       | | +                 T T
      G     A T G T
        T T        G     TAAC
                    G + T
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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