The detailed information of tRNA gene sequence


Sequence ID>SRA1009902
Genome IDSRR020491.396958
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 164
End posion on genome 74
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acatgaatag
tRNA gene sequence 
GGAGGGTTGGCCGAGCGGACGAAGGCACCAGTCTTGAAAACTGGCATACCCTAATCGGGT
ATCGTGGGTTCGAATCCCACACCCTCCGCCA
Downstream region at tRNA end position 
gatcagaaaa
Secondary structure (Cloverleaf model)
>SRA1009902	Ser	TGA
                   g      GCCA gatcagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        A     CATACCCTAATCGGGTATC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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