The detailed information of tRNA gene sequence


Sequence ID>SRA1009914
Genome IDSRR020491.400574
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 146
End posion on genome 223
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tccacccgtt
tRNA gene sequence 
CGGGGTGTAGCGTAGTCCGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGGAGGTTCAA
ATCCTCTCACCCCGACAA
Downstream region at tRNA end position 
atttataatt
Secondary structure (Cloverleaf model)
>SRA1009914	Pro	TGG
                   t      ACAA atttataatt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     A
  C         T G C G       G G A G G     C
  G         + | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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