The detailed information of tRNA gene sequence


Sequence ID>SRA1009933
Genome IDSRR020491.405576
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 171
End posion on genome 95
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagaaaattT
tRNA gene sequence 
GGATTCGTCGTCTAGCTTGGTTTGGATGCCGCACTCACACTGCGGAGGTCAAGGGTTCAA
ATCCCTTCGGATCCATtt
Downstream region at tRNA end position 
ttagtatata
Secondary structure (Cloverleaf model)
>SRA1009933	Val	CAC
                   T      ATtt ttagtatata
                     G - C
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C G A        C      | | | | |     A
  T         T C T G       A A G G G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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