The detailed information of tRNA gene sequence


Sequence ID>SRA1009943
Genome IDSRR020491.408037
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 87
End posion on genome 11
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtaacccaat
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCAAA
TCCTGCCGCCCCGACCA
Downstream region at tRNA end position 
ttaaatatat
Secondary structure (Cloverleaf model)
>SRA1009943	Pro	TGG
                   t      ACCA ttaaatatat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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