The detailed information of tRNA gene sequence


Sequence ID>SRA1009953
Genome IDSRR020491.411078
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 188
End posion on genome 272
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atcgtttttt
tRNA gene sequence 
GCAGAGGTCGCTTAGCCTGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGTGCAAGCACGCG
GGGGTTCGAATCCCTCTCTCTGCGCgt
Downstream region at tRNA end position 
cggaaaaann
Secondary structure (Cloverleaf model)
>SRA1009953	Ser	TGA
                   t      GCgt cggaaaaann
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     G
    C       T T C G       G G G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     TGTGTGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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