The detailed information of tRNA gene sequence


Sequence ID>SRA1009978
Genome IDSRR020491.418726
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 114
End posion on genome 40
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttatttatac
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGTAGTGCATGGGCCTGCAAAGCCTAGTGTCGGGAGTTCAAA
TCTCTCCCTCACCTCtt
Downstream region at tRNA end position 
tgatcttggt
Secondary structure (Cloverleaf model)
>SRA1009978	Cys	GCA
                   c      TCtt tgatcttggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | + | | |     A
    C       C A T G       G G G A G     C
    C       | | + |                 T T
    G       G T G C
      G T A        A     GTGTC
                    T - A
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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