The detailed information of tRNA gene sequence


Sequence ID>SRA1009987
Genome IDSRR020491.421427
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 61
End posion on genome 137
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gattaacgat
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAA
TCCAGCCCCCGCTACAA
Downstream region at tRNA end position 
tgaaaacccg
Secondary structure (Cloverleaf model)
>SRA1009987	Met	CAT
                   t      ACAA tgaaaacccg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    C       C G A G       G C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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