The detailed information of tRNA gene sequence


Sequence ID>SRA1009996
Genome IDSRR020491.424357
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 159
End posion on genome 251
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcggcttcc
tRNA gene sequence 
GGAGAGGTGCTAGAGCGGCCGAATAGGCGCGACTGGAAATCGCGTGTCTCGTTAATTGCG
GGACCATGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
tcgctccgcc
Secondary structure (Cloverleaf model)
>SRA1009996	Ser	GGA
                   c      GCCA tcgctccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        G      | | | | |     G
    G       G A T C       A T G G G     C
    G         | | |                 T T
    C       A T A G
      C G A        G     TGTCTCGTTAATTGCGGGACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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