The detailed information of tRNA gene sequence


Sequence ID>SRA1010000
Genome IDSRR020491.426440
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 100
End posion on genome 26
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
caaaagtcaT
tRNA gene sequence 
GGGCCTGTGGCGCAGCTGGGAGCGCGCCTGACTGGCAGTCAGGAGGTCAGGGGTTCGATC
CCCCTCAGGTCCATtt
Downstream region at tRNA end position 
tattttcaac
Secondary structure (Cloverleaf model)
>SRA1010000	Ala	GGC
                   T      ATtt tattttcaac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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