The detailed information of tRNA gene sequence


Sequence ID>SRA1010001
Genome IDSRR020491.426907
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 86
End posion on genome 10
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtaagctctt
tRNA gene sequence 
AGGAGCGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGGGGGGTTCGAT
TCCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
aatagagaan
Secondary structure (Cloverleaf model)
>SRA1010001	Trp	CCA
                   t      GCCA aatagagaan
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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