The detailed information of tRNA gene sequence


Sequence ID>SRA1010005
Genome IDSRR020491.428169
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 290
End posion on genome 219
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
nnnnnnnnct
tRNA gene sequence 
GCGGGTGTAGTTCAATGGTAGAACCCCAGCCTTCCAAGCTGGTGGCGTGGGTTCGATTCC
CATCACCCGCTCag
Downstream region at tRNA end position 
agcggaaagt
Secondary structure (Cloverleaf model)
>SRA1010005	Gly	TCC
                   t      TCag agcggaaagt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T A C C C     A
        A A        A      + | | | |     G
      T     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        C     TGGC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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