The detailed information of tRNA gene sequence


Sequence ID>SRA1010018
Genome IDSRR020491.430300
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 69
End posion on genome 157
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taggctatgg
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCTTATGGCGCCGCTCTCGAAAAGCGGTTCTCGACTACGTCGG
GACGTGGGTTCAAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
aacttggcac
Secondary structure (Cloverleaf model)
>SRA1010018	Ser	CGA
                   g      GCtg aacttggcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    C       T G G C
      T T A        G     TTCTCGACTACGTCGGGAC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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