The detailed information of tRNA gene sequence


Sequence ID>SRA1010020
Genome IDSRR020491.431367
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 295
End posion on genome 220
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tttttgtttt
tRNA gene sequence 
TCCNCGGTAGCTCAGTTGGTAGAGCAGTTGACTGTTAATCAATTGGTCGCAGGTTCGAGT
CCTGCCCGAGGAGCCA
Downstream region at tRNA end position 
aaactatcct
Secondary structure (Cloverleaf model)
>SRA1010020	Asn	GTT
                   t      GCCA aaactatcct
                     T - A
                     C - G
                     C - G
                     N   A
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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