The detailed information of tRNA gene sequence


Sequence ID>SRA1010024
Genome IDSRR020491.431628
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 241
End posion on genome 165
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnnnnncgg
tRNA gene sequence 
GGTCGCTTAGCTCAGCTTGGAAGAGCACCTGGTTTGCAACCAGGTGGCCGGGGGTTCAAA
TCCCCCAGCGTCCACCA
Downstream region at tRNA end position 
cttcactact
Secondary structure (Cloverleaf model)
>SRA1010024	Ala	TGC
                   g      ACCA cttcactact
                     G - C
                     G - C
                     T   T
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        A     TGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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